STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KU46_131Capsule polysaccharide biosynthesis family protein. (369 aa)    
Predicted Functional Partners:
KU46_155
Chain length determinant family protein.
 
  
 0.887
KU46_153
ABC-2 type transporter family protein.
 
  
 0.878
KU46_154
ABC transporter family protein.
 
  
 0.874
KU46_152
Polysaccharide biosynthesis/export family protein.
 
  
 0.872
KU46_158
Polysaccharide biosynthesis/export family protein.
 
  
 0.872
KU46_159
Capsule polysaccharide biosynthesis family protein.
   
 0.853
KU46_132
Hypothetical protein.
       0.773
KU46_161
Sulfatase family protein.
 
     0.748
KU46_167
Zinc-binding dehydrogenase family protein.
 
     0.696
KU46_162
Hypothetical protein.
  
     0.658
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.