STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufBsufB: FeS assembly protein SufB. (481 aa)    
Predicted Functional Partners:
sufC
sufC: FeS assembly ATPase SufC.
 
 0.999
sufD
sufD: FeS assembly protein SufD.
 
 0.999
sufS
Cysteine desulfurase, SufS family protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.993
KU46_1533
suf_reg_Xantho: FeS assembly SUF system regulator.
     
 0.821
KU46_1256
Iron-sulfur cluster assembly accessory family protein; Belongs to the HesB/IscA family.
  
 
 0.802
KU46_1257
Hypothetical protein.
 
   
 0.741
KU46_2009
fe-S metabolism associated domain protein.
 
 
 0.709
KU46_1532
trkA-N domain protein.
       0.522
trxA
Thioredoxin: thioredoxin; Belongs to the thioredoxin family.
  
    0.461
erpA
Iron-sulfur cluster assembly accessory family protein; Required for insertion of 4Fe-4S clusters for at least IspG.
  
 
 0.458
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.