STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KU46_160Short chain dehydrogenase family protein. (251 aa)    
Predicted Functional Partners:
KU46_159
Capsule polysaccharide biosynthesis family protein.
     0.964
KU46_167
Zinc-binding dehydrogenase family protein.
 
 0.919
KU46_161
Sulfatase family protein.
 
     0.876
KU46_256
Thioester-redct: thioester reductase domain protein.
  
 0.758
KU46_75
enoyl-CoA hydratase/isomerase family protein.
  
 0.684
KU46_162
Hypothetical protein.
  
  0.678
KU46_163
Cytochrome P450 family protein.
  
  0.666
KU46_1488
Short chain dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.641
KU46_158
Polysaccharide biosynthesis/export family protein.
 
     0.632
KU46_665
Short chain dehydrogenase family protein.
  
     0.626
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.