STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KU46_1729Mechanosensitive ion channel family protein. (277 aa)    
Predicted Functional Partners:
KU46_1117
Major Facilitator Superfamily protein.
  
     0.663
KU46_1067
Major Facilitator Superfamily protein.
  
     0.647
KU46_819
proQ/FINO family protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
     0.575
KU46_1203
Polysaccharide biosynthesis family protein.
  
     0.531
KU46_1115
Hypothetical protein.
  
     0.524
KU46_83
Hypothetical protein.
  
     0.444
KU46_1792
Major Facilitator Superfamily protein.
  
     0.442
KU46_1608
Tetratricopeptide repeat family protein.
  
     0.420
KU46_1520
Zinc carboxypeptidase family protein.
  
     0.411
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.