Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KU46_197Hypothetical protein. (173 aa)    
Predicted Functional Partners:
KU46_196
Putative membrane protein.
       0.773
KU46_195
Integrase core domain protein.
       0.511
KU46_363
Carbohydrate binding domain protein.
   
 
 0.498
KU46_1487
Hypothetical protein; Glycosyl hydrolase family 3 N terminal domain protein.
    
  0.480
KU46_213
Subtilase family protein.
  
 
 0.423
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.414
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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