STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KU46_236Bacterial lipid A biosynthesis acyltransferase family protein. (307 aa)    
Predicted Functional Partners:
KU46_235
Glycosyltransferase like 2 family protein.
     0.994
KU46_239
MMPL family protein.
 
  
 0.959
KU46_238
Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.954
KU46_234
fabA-like domain protein.
 
     0.932
KU46_237
Thioesterase superfamily protein.
 
    0.909
KU46_232
Putative membrane protein.
 
     0.906
KU46_233
AMP-binding enzyme family protein.
 
     0.906
KU46_230
Phosphopantetheine attachment site family protein.
 
    0.899
KU46_228
Hypothetical protein; Beta-ketoacyl synthase, N-terminal domain protein.
 
    0.897
KU46_229
Acyltransferase family protein.
 
     0.889
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.