STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KU46_752Bacterial transferase hexapeptide family protein. (172 aa)    
Predicted Functional Partners:
cysK
cysK: cysteine synthase A.
 
 0.994
cysS
cysS: cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.987
KU46_1930
Pyridoxal-phosphate dependent enzyme family protein.
 
 0.908
KU46_1254
Sda_mono: L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.894
KU46_1064
Asp_kinase: aspartate kinase domain protein; In the C-terminal section; belongs to the homoserine dehydrogenase family.
    
 0.756
KU46_1044
OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein.
    
 0.755
KU46_1840
EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein.
  
 
 0.754
gpsA
Ketopantoate reductase PanE/ApbA family protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.754
trpF
Indole-3-glycerol phosphate synthase family protein; Belongs to the TrpC family.
     
 0.746
KU46_1245
HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, IB family protein.
    
 0.724
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.