STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KU46_839Putative pilus assembly protein. (306 aa)    
Predicted Functional Partners:
KU46_840
Carbohydrate binding domain protein.
       0.762
KU46_836
Putative pilus assembly protein.
  
  
 0.747
KU46_838
Putative pilus assembly protein.
       0.741
cysS
cysS: cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.550
prmC-2
protein-(glutamine-N5) methyltransferase, release factor-specific; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
       0.550
KU46_912
Hypothetical protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein.
  
  
 0.538
KU46_837
Putative pilus assembly protein.
       0.525
KU46_178
Hypothetical protein.
  
  
 0.496
KU46_835
Putative pilus assembly protein.
  
  
0.461
KU46_844
Acetyltransferase domain protein.
       0.438
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.