STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KU46_87Methyltransferase small domain protein. (215 aa)    
Predicted Functional Partners:
KU46_167
Zinc-binding dehydrogenase family protein.
 
  
 0.801
KU46_88
Putative membrane protein.
       0.741
KU46_256
Thioester-redct: thioester reductase domain protein.
    
 0.620
KU46_86
Hypothetical protein.
       0.551
KU46_1761
FAD binding domain protein.
  
 
 0.531
KU46_89
Putative outer membrane protein.
       0.476
KU46_1128
Cytochrome P450 family protein.
    
 0.446
KU46_163
Cytochrome P450 family protein.
    
 0.446
KU46_1140
AMP-binding enzyme family protein.
    
 0.428
KU46_83
Hypothetical protein.
       0.426
Your Current Organism:
Francisella philomiragia
NCBI taxonomy Id: 28110
Other names: ATCC 25015, CCUG 19700, CCUG 4992, CIP 82.98, DSM 7535, F. philomiragia, Francisella philomiragia subsp. philomiragia, Yersinia philomiragia, strain O#319L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.