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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ47_02065Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)    
Predicted Functional Partners:
ftsX
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.965
HQ47_00675
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.860
HQ47_02055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.609
HQ47_02060
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.
       0.586
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.550
HQ47_10385
Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.510
HQ47_02070
Pyrazinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
HQ47_08495
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.449
HQ47_00680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.448
Your Current Organism:
Porphyromonas macacae
NCBI taxonomy Id: 28115
Other names: ATCC 33141, Bacteroides macacae, Bacteroides melaninogenicus macacae, Bacteroides melaninogenicus subsp. macacae, Bacteroides salivosus, CCUG 47703, DSM 20710, JCM 13914, NCTC 13100, P. macacae, Porphyromonas salivosa, Slots strain 7728-L6C, strain 7728-L6C
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