Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ44699.1 | ALJ44702.1 | Bovatus_00027 | Bovatus_00030 | Hypothetical protein. | SusD family protein. | 0.417 |
ALJ44699.1 | btuB_2 | Bovatus_00027 | Bovatus_00029 | Hypothetical protein. | Vitamin B12 transporter BtuB. | 0.464 |
ALJ44699.1 | sigE_1 | Bovatus_00027 | Bovatus_00028 | Hypothetical protein. | ECF RNA polymerase sigma factor SigE. | 0.561 |
ALJ44702.1 | ALJ44699.1 | Bovatus_00030 | Bovatus_00027 | SusD family protein. | Hypothetical protein. | 0.417 |
ALJ44702.1 | btuB_2 | Bovatus_00030 | Bovatus_00029 | SusD family protein. | Vitamin B12 transporter BtuB. | 0.936 |
ALJ44702.1 | sigE_1 | Bovatus_00030 | Bovatus_00028 | SusD family protein. | ECF RNA polymerase sigma factor SigE. | 0.619 |
btuB_2 | ALJ44699.1 | Bovatus_00029 | Bovatus_00027 | Vitamin B12 transporter BtuB. | Hypothetical protein. | 0.464 |
btuB_2 | ALJ44702.1 | Bovatus_00029 | Bovatus_00030 | Vitamin B12 transporter BtuB. | SusD family protein. | 0.936 |
btuB_2 | sigE_1 | Bovatus_00029 | Bovatus_00028 | Vitamin B12 transporter BtuB. | ECF RNA polymerase sigma factor SigE. | 0.638 |
sigE_1 | ALJ44699.1 | Bovatus_00028 | Bovatus_00027 | ECF RNA polymerase sigma factor SigE. | Hypothetical protein. | 0.561 |
sigE_1 | ALJ44702.1 | Bovatus_00028 | Bovatus_00030 | ECF RNA polymerase sigma factor SigE. | SusD family protein. | 0.619 |
sigE_1 | btuB_2 | Bovatus_00028 | Bovatus_00029 | ECF RNA polymerase sigma factor SigE. | Vitamin B12 transporter BtuB. | 0.638 |