Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ45043.1 | ALJ45044.1 | Bovatus_00375 | Bovatus_00376 | Hypothetical protein. | Hypothetical protein. | 0.839 |
ALJ45043.1 | ALJ45046.1 | Bovatus_00375 | Bovatus_00378 | Hypothetical protein. | Hypothetical protein. | 0.675 |
ALJ45043.1 | ssb_1 | Bovatus_00375 | Bovatus_00377 | Hypothetical protein. | Single-stranded DNA-binding protein. | 0.799 |
ALJ45044.1 | ALJ45043.1 | Bovatus_00376 | Bovatus_00375 | Hypothetical protein. | Hypothetical protein. | 0.839 |
ALJ45044.1 | ALJ45046.1 | Bovatus_00376 | Bovatus_00378 | Hypothetical protein. | Hypothetical protein. | 0.675 |
ALJ45044.1 | ssb_1 | Bovatus_00376 | Bovatus_00377 | Hypothetical protein. | Single-stranded DNA-binding protein. | 0.797 |
ALJ45046.1 | ALJ45043.1 | Bovatus_00378 | Bovatus_00375 | Hypothetical protein. | Hypothetical protein. | 0.675 |
ALJ45046.1 | ALJ45044.1 | Bovatus_00378 | Bovatus_00376 | Hypothetical protein. | Hypothetical protein. | 0.675 |
ALJ45046.1 | ssb_1 | Bovatus_00378 | Bovatus_00377 | Hypothetical protein. | Single-stranded DNA-binding protein. | 0.675 |
ALJ48763.1 | dnaE | Bovatus_04169 | Bovatus_02294 | Single-stranded DNA-binding protein. | DNA polymerase III subunit alpha. | 0.669 |
ALJ48763.1 | polA | Bovatus_04169 | Bovatus_03350 | Single-stranded DNA-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.461 |
ALJ48763.1 | priA | Bovatus_04169 | Bovatus_02819 | Single-stranded DNA-binding protein. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.582 |
ALJ48763.1 | rpsF | Bovatus_04169 | Bovatus_02234 | Single-stranded DNA-binding protein. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.613 |
ALJ48763.1 | rpsG | Bovatus_04169 | Bovatus_02789 | Single-stranded DNA-binding protein. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.559 |
ALJ48763.1 | ssb_1 | Bovatus_04169 | Bovatus_00377 | Single-stranded DNA-binding protein. | Single-stranded DNA-binding protein. | 0.900 |
ALJ48763.1 | ssb_2 | Bovatus_04169 | Bovatus_01578 | Single-stranded DNA-binding protein. | Single-stranded DNA-binding protein. | 0.900 |
dnaE | ALJ48763.1 | Bovatus_02294 | Bovatus_04169 | DNA polymerase III subunit alpha. | Single-stranded DNA-binding protein. | 0.669 |
dnaE | polA | Bovatus_02294 | Bovatus_03350 | DNA polymerase III subunit alpha. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.819 |
dnaE | ssb_1 | Bovatus_02294 | Bovatus_00377 | DNA polymerase III subunit alpha. | Single-stranded DNA-binding protein. | 0.669 |
dnaE | ssb_2 | Bovatus_02294 | Bovatus_01578 | DNA polymerase III subunit alpha. | Single-stranded DNA-binding protein. | 0.669 |
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