Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ45525.1 | ALJ45526.1 | Bovatus_00868 | Bovatus_00869 | Fec operon regulator FecR. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.747 |
ALJ45525.1 | ALJ46426.1 | Bovatus_00868 | Bovatus_01786 | Fec operon regulator FecR. | Fec operon regulator FecR. | 0.761 |
ALJ45525.1 | fecI_1 | Bovatus_00868 | Bovatus_01286 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.759 |
ALJ45525.1 | rpoE_4 | Bovatus_00868 | Bovatus_03842 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.748 |
ALJ45525.1 | sigE_1 | Bovatus_00868 | Bovatus_00028 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigE. | 0.662 |
ALJ45525.1 | sigW_12 | Bovatus_00868 | Bovatus_04993 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.645 |
ALJ45525.1 | sigW_5 | Bovatus_00868 | Bovatus_02241 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.651 |
ALJ45525.1 | ylaC_1 | Bovatus_00868 | Bovatus_00016 | Fec operon regulator FecR. | RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily. | 0.774 |
ALJ45525.1 | ylaC_2 | Bovatus_00868 | Bovatus_00036 | Fec operon regulator FecR. | RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily. | 0.772 |
ALJ45525.1 | ylaC_3 | Bovatus_00868 | Bovatus_03851 | Fec operon regulator FecR. | RNA polymerase sigma factor YlaC. | 0.739 |
ALJ45526.1 | ALJ45525.1 | Bovatus_00869 | Bovatus_00868 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Fec operon regulator FecR. | 0.747 |
ALJ45526.1 | rpoE_4 | Bovatus_00869 | Bovatus_03842 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.679 |
ALJ45526.1 | sigE_1 | Bovatus_00869 | Bovatus_00028 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | ECF RNA polymerase sigma factor SigE. | 0.429 |
ALJ45526.1 | sigW_12 | Bovatus_00869 | Bovatus_04993 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.555 |
ALJ45526.1 | ylaC_2 | Bovatus_00869 | Bovatus_00036 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily. | 0.491 |
ALJ46426.1 | ALJ45525.1 | Bovatus_01786 | Bovatus_00868 | Fec operon regulator FecR. | Fec operon regulator FecR. | 0.761 |
ALJ46426.1 | rpoE_4 | Bovatus_01786 | Bovatus_03842 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.409 |
ALJ46426.1 | sigE_1 | Bovatus_01786 | Bovatus_00028 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigE. | 0.467 |
ALJ46426.1 | sigW_12 | Bovatus_01786 | Bovatus_04993 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.404 |
ALJ46426.1 | ylaC_1 | Bovatus_01786 | Bovatus_00016 | Fec operon regulator FecR. | RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily. | 0.569 |
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