STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ45766.1IS66 Orf2 like protein. (114 aa)    
Predicted Functional Partners:
ALJ45767.1
Hypothetical protein.
       0.775
ALJ45765.1
Transposase IS66 family protein.
 
     0.756
ALJ45768.1
Hypothetical protein.
       0.623
ALJ47771.1
Transposase IS66 family protein.
 
     0.549
ALJ47019.1
Transposase IS66 family protein.
 
     0.547
ALJ45410.1
Transposase IS66 family protein.
 
     0.516
ALJ46650.1
Transposase IS66 family protein.
 
     0.441
ALJ47967.1
Transposase IS66 family protein.
 
     0.441
ALJ48692.1
Transposase IS66 family protein.
 
     0.441
ALJ45770.1
Glycosyltransferase family 6.
  
    0.440
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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