Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ45991.1 | ALJ47518.1 | Bovatus_01345 | Bovatus_02908 | Tetratricopeptide repeat protein. | Tol-pal system protein YbgF. | 0.446 |
ALJ45991.1 | ALJ48203.1 | Bovatus_01345 | Bovatus_03597 | Tetratricopeptide repeat protein. | Tetratricopeptide repeat protein. | 0.777 |
ALJ45991.1 | pgaC_2 | Bovatus_01345 | Bovatus_01556 | Tetratricopeptide repeat protein. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.577 |
ALJ46199.1 | dctB_2 | Bovatus_01555 | Bovatus_01554 | Putative inner membrane protein. | C4-dicarboxylate transport sensor protein DctB. | 0.610 |
ALJ46199.1 | pgaC_2 | Bovatus_01555 | Bovatus_01556 | Putative inner membrane protein. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.679 |
ALJ46199.1 | zraR_3 | Bovatus_01555 | Bovatus_01553 | Putative inner membrane protein. | Transcriptional regulatory protein ZraR. | 0.612 |
ALJ46546.1 | ALJ48203.1 | Bovatus_01906 | Bovatus_03597 | Peptidase family M49. | Tetratricopeptide repeat protein. | 0.528 |
ALJ46546.1 | pgaC_2 | Bovatus_01906 | Bovatus_01556 | Peptidase family M49. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.603 |
ALJ47444.1 | ALJ48568.1 | Bovatus_02831 | Bovatus_03971 | Hypothetical protein. | Peptidylprolyl isomerase. | 0.623 |
ALJ47444.1 | pgaC_2 | Bovatus_02831 | Bovatus_01556 | Hypothetical protein. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.713 |
ALJ47518.1 | ALJ45991.1 | Bovatus_02908 | Bovatus_01345 | Tol-pal system protein YbgF. | Tetratricopeptide repeat protein. | 0.446 |
ALJ47518.1 | pgaC_2 | Bovatus_02908 | Bovatus_01556 | Tol-pal system protein YbgF. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.474 |
ALJ48203.1 | ALJ45991.1 | Bovatus_03597 | Bovatus_01345 | Tetratricopeptide repeat protein. | Tetratricopeptide repeat protein. | 0.777 |
ALJ48203.1 | ALJ46546.1 | Bovatus_03597 | Bovatus_01906 | Tetratricopeptide repeat protein. | Peptidase family M49. | 0.528 |
ALJ48203.1 | ALJ48568.1 | Bovatus_03597 | Bovatus_03971 | Tetratricopeptide repeat protein. | Peptidylprolyl isomerase. | 0.598 |
ALJ48203.1 | pgaC_2 | Bovatus_03597 | Bovatus_01556 | Tetratricopeptide repeat protein. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.511 |
ALJ48568.1 | ALJ47444.1 | Bovatus_03971 | Bovatus_02831 | Peptidylprolyl isomerase. | Hypothetical protein. | 0.623 |
ALJ48568.1 | ALJ48203.1 | Bovatus_03971 | Bovatus_03597 | Peptidylprolyl isomerase. | Tetratricopeptide repeat protein. | 0.598 |
ALJ48568.1 | pgaC_2 | Bovatus_03971 | Bovatus_01556 | Peptidylprolyl isomerase. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.626 |
dctB_2 | ALJ46199.1 | Bovatus_01554 | Bovatus_01555 | C4-dicarboxylate transport sensor protein DctB. | Putative inner membrane protein. | 0.610 |
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