Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpA_1 | bfmBAB | Bovatus_00927 | Bovatus_00157 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 2-oxoisovalerate dehydrogenase subunit beta. | 0.591 |
| atpA_1 | merA | Bovatus_00927 | Bovatus_01626 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Mercuric reductase. | 0.559 |
| atpA_1 | nuoC | Bovatus_00927 | Bovatus_04321 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.993 |
| atpA_1 | pdhC | Bovatus_00927 | Bovatus_00156 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex. | 0.703 |
| atpA_1 | prs | Bovatus_00927 | Bovatus_00873 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Ribose-phosphate pyrophosphokinase. | 0.563 |
| bfmBAB | atpA_1 | Bovatus_00157 | Bovatus_00927 | 2-oxoisovalerate dehydrogenase subunit beta. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.591 |
| bfmBAB | gcvH | Bovatus_00157 | Bovatus_02671 | 2-oxoisovalerate dehydrogenase subunit beta. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.864 |
| bfmBAB | lplA | Bovatus_00157 | Bovatus_00155 | 2-oxoisovalerate dehydrogenase subunit beta. | Putative lipoate-protein ligase A. | 0.986 |
| bfmBAB | maeB | Bovatus_00157 | Bovatus_02022 | 2-oxoisovalerate dehydrogenase subunit beta. | NADP-dependent malic enzyme. | 0.925 |
| bfmBAB | merA | Bovatus_00157 | Bovatus_01626 | 2-oxoisovalerate dehydrogenase subunit beta. | Mercuric reductase. | 0.997 |
| bfmBAB | nuoC | Bovatus_00157 | Bovatus_04321 | 2-oxoisovalerate dehydrogenase subunit beta. | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.873 |
| bfmBAB | pdhC | Bovatus_00157 | Bovatus_00156 | 2-oxoisovalerate dehydrogenase subunit beta. | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex. | 0.999 |
| bfmBAB | prs | Bovatus_00157 | Bovatus_00873 | 2-oxoisovalerate dehydrogenase subunit beta. | Ribose-phosphate pyrophosphokinase. | 0.985 |
| gcvH | bfmBAB | Bovatus_02671 | Bovatus_00157 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 2-oxoisovalerate dehydrogenase subunit beta. | 0.864 |
| gcvH | lplA | Bovatus_02671 | Bovatus_00155 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Putative lipoate-protein ligase A. | 0.970 |
| gcvH | maeB | Bovatus_02671 | Bovatus_02022 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | NADP-dependent malic enzyme. | 0.409 |
| gcvH | merA | Bovatus_02671 | Bovatus_01626 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Mercuric reductase. | 0.701 |
| gcvH | pdhC | Bovatus_02671 | Bovatus_00156 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex. | 0.877 |
| gcvH | prs | Bovatus_02671 | Bovatus_00873 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Ribose-phosphate pyrophosphokinase. | 0.777 |
| lplA | bfmBAB | Bovatus_00155 | Bovatus_00157 | Putative lipoate-protein ligase A. | 2-oxoisovalerate dehydrogenase subunit beta. | 0.986 |
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