STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ46568.1Transcriptional regulator BetI. (201 aa)    
Predicted Functional Partners:
ALJ46569.1
Hypothetical protein.
       0.711
hepB
Heparin and heparin-sulfate lyase precursor.
  
     0.623
ALJ46570.1
Hypothetical protein.
       0.572
ALJ49240.1
Heparinase II/III-like protein.
  
     0.572
ALJ47853.1
Heparinase II/III-like protein.
  
     0.549
ALJ48360.1
Fluoroquinolones export ATP-binding protein.
 
   
 0.542
ALJ49001.1
Phage integrase family protein; Belongs to the 'phage' integrase family.
  
  
 0.536
ALJ45884.1
Hypothetical protein.
  
    0.532
ALJ49449.1
Hypothetical protein.
  
     0.528
ALJ46567.1
NADP-dependent 7-alpha-hydroxysteroid dehydrogenase.
     
 0.521
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.