Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALJ46729.1 | ALJ46730.1 | Bovatus_02095 | Bovatus_02096 | Hypothetical protein. | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.821 |
| ALJ46729.1 | ALJ46731.1 | Bovatus_02095 | Bovatus_02097 | Hypothetical protein. | Gram-negative bacterial tonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.602 |
| ALJ46729.1 | cmk | Bovatus_02095 | Bovatus_02098 | Hypothetical protein. | Cytidylate kinase. | 0.446 |
| ALJ46729.1 | ispH | Bovatus_02095 | Bovatus_02099 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.425 |
| ALJ46729.1 | ycfH | Bovatus_02095 | Bovatus_02094 | Hypothetical protein. | Putative deoxyribonuclease YcfH. | 0.839 |
| ALJ46730.1 | ALJ46729.1 | Bovatus_02096 | Bovatus_02095 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.821 |
| ALJ46730.1 | ALJ46731.1 | Bovatus_02096 | Bovatus_02097 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Gram-negative bacterial tonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.692 |
| ALJ46730.1 | ALJ47833.1 | Bovatus_02096 | Bovatus_03225 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.592 |
| ALJ46730.1 | cmk | Bovatus_02096 | Bovatus_02098 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Cytidylate kinase. | 0.785 |
| ALJ46730.1 | ispH | Bovatus_02096 | Bovatus_02099 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.957 |
| ALJ46730.1 | lolD | Bovatus_02096 | Bovatus_03765 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.595 |
| ALJ46730.1 | ppnK | Bovatus_02096 | Bovatus_04034 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.593 |
| ALJ46730.1 | sdsA | Bovatus_02096 | Bovatus_03351 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific); Belongs to the FPP/GGPP synthase family. | 0.925 |
| ALJ46730.1 | uppS | Bovatus_02096 | Bovatus_03832 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.979 |
| ALJ46730.1 | ycfH | Bovatus_02096 | Bovatus_02094 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Putative deoxyribonuclease YcfH. | 0.841 |
| ALJ46731.1 | ALJ46729.1 | Bovatus_02097 | Bovatus_02095 | Gram-negative bacterial tonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.602 |
| ALJ46731.1 | ALJ46730.1 | Bovatus_02097 | Bovatus_02096 | Gram-negative bacterial tonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.692 |
| ALJ46731.1 | cmk | Bovatus_02097 | Bovatus_02098 | Gram-negative bacterial tonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Cytidylate kinase. | 0.570 |
| ALJ46731.1 | ispH | Bovatus_02097 | Bovatus_02099 | Gram-negative bacterial tonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.566 |
| ALJ46731.1 | ycfH | Bovatus_02097 | Bovatus_02094 | Gram-negative bacterial tonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Putative deoxyribonuclease YcfH. | 0.719 |
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