STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_11Macrolide export ATP-binding/permease protein MacB. (413 aa)    
Predicted Functional Partners:
macB_9
Macrolide export ATP-binding/permease protein MacB.
 
 0.997
macB_2
Macrolide export ATP-binding/permease protein MacB.
 
 0.987
macB_7
Macrolide export ATP-binding/permease protein MacB.
 
 0.984
ytrE_3
ABC transporter ATP-binding protein YtrE.
 
 0.983
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
 0.982
ytrE_2
ABC transporter ATP-binding protein YtrE.
 
 0.982
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 0.963
macA_3
Macrolide export protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.958
macB_10
Macrolide export ATP-binding/permease protein MacB.
 
   
0.907
ftsE
Cell division ATP-binding protein FtsE.
    
 0.885
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.