STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ47345.1Colicin uptake protein TolQ. (265 aa)    
Predicted Functional Partners:
ALJ47344.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.979
ALJ47343.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.977
ALJ47342.1
Gram-negative bacterial tonB protein.
 
 
 0.957
pstS_2
Phosphate-binding protein PstS precursor.
 
  
 0.940
ALJ47340.1
Cellulose synthase subunit BcsC.
 
    0.922
ttgC
Putative efflux pump outer membrane protein TtgC precursor.
  
   
 0.651
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
 
   
 0.650
ALJ46724.1
Biopolymer transport protein ExbD/TolR.
  
 
 0.628
ALJ46725.1
Biopolymer transport protein ExbD/TolR.
  
 
 0.628
ALJ48632.1
Colicin uptake protein TolR.
  
 
 0.628
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
Server load: low (12%) [HD]