STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ47444.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
yvqK
Cob(I)yrinic acid a,c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
  
    0.773
pgaC_2
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
   
 0.713
ALJ47442.1
Hypothetical protein.
       0.671
ALJ45461.1
Sporulation related domain protein.
 
     0.623
ALJ48568.1
Peptidylprolyl isomerase.
 
     0.623
ALJ47297.1
Hypothetical protein.
 
    0.618
ALJ45127.1
Hypothetical protein.
  
     0.612
mreD
Hypothetical protein.
  
     0.587
ALJ49336.1
Anaphase-promoting complex, cyclosome, subunit 3.
 
     0.570
btuB_15
Vitamin B12 transporter BtuB.
 
     0.567
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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