Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ47481.1 | ALJ47482.1 | Bovatus_02871 | Bovatus_02872 | Hypothetical protein. | Hypothetical protein. | 0.761 |
ALJ47481.1 | ALJ47483.1 | Bovatus_02871 | Bovatus_02873 | Hypothetical protein. | Endonuclease/Exonuclease/phosphatase family protein. | 0.760 |
ALJ47481.1 | ALJ47484.1 | Bovatus_02871 | Bovatus_02874 | Hypothetical protein. | Fec operon regulator FecR. | 0.668 |
ALJ47482.1 | ALJ47481.1 | Bovatus_02872 | Bovatus_02871 | Hypothetical protein. | Hypothetical protein. | 0.761 |
ALJ47482.1 | ALJ47483.1 | Bovatus_02872 | Bovatus_02873 | Hypothetical protein. | Endonuclease/Exonuclease/phosphatase family protein. | 0.786 |
ALJ47482.1 | ALJ47484.1 | Bovatus_02872 | Bovatus_02874 | Hypothetical protein. | Fec operon regulator FecR. | 0.685 |
ALJ47483.1 | ALJ47481.1 | Bovatus_02873 | Bovatus_02871 | Endonuclease/Exonuclease/phosphatase family protein. | Hypothetical protein. | 0.760 |
ALJ47483.1 | ALJ47482.1 | Bovatus_02873 | Bovatus_02872 | Endonuclease/Exonuclease/phosphatase family protein. | Hypothetical protein. | 0.786 |
ALJ47483.1 | ALJ47484.1 | Bovatus_02873 | Bovatus_02874 | Endonuclease/Exonuclease/phosphatase family protein. | Fec operon regulator FecR. | 0.685 |
ALJ47484.1 | ALJ47481.1 | Bovatus_02874 | Bovatus_02871 | Fec operon regulator FecR. | Hypothetical protein. | 0.668 |
ALJ47484.1 | ALJ47482.1 | Bovatus_02874 | Bovatus_02872 | Fec operon regulator FecR. | Hypothetical protein. | 0.685 |
ALJ47484.1 | ALJ47483.1 | Bovatus_02874 | Bovatus_02873 | Fec operon regulator FecR. | Endonuclease/Exonuclease/phosphatase family protein. | 0.685 |
ALJ47484.1 | fecI_1 | Bovatus_02874 | Bovatus_01286 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.764 |
ALJ47484.1 | rpoE_4 | Bovatus_02874 | Bovatus_03842 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.752 |
ALJ47484.1 | sigE_1 | Bovatus_02874 | Bovatus_00028 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigE. | 0.674 |
ALJ47484.1 | sigW_5 | Bovatus_02874 | Bovatus_02241 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.646 |
ALJ47484.1 | ylaC_1 | Bovatus_02874 | Bovatus_00016 | Fec operon regulator FecR. | RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily. | 0.786 |
ALJ47484.1 | ylaC_2 | Bovatus_02874 | Bovatus_00036 | Fec operon regulator FecR. | RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily. | 0.759 |
ALJ47484.1 | ylaC_3 | Bovatus_02874 | Bovatus_03851 | Fec operon regulator FecR. | RNA polymerase sigma factor YlaC. | 0.749 |
fecI_1 | ALJ47484.1 | Bovatus_01286 | Bovatus_02874 | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | Fec operon regulator FecR. | 0.764 |
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