STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uidA_3Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (598 aa)    
Predicted Functional Partners:
uxaC
Uronate isomerase.
 
 
 0.932
uidA_4
Beta-glucuronidase.
  
  
 
0.901
ALJ44885.1
Extracellular exo-alpha-L-arabinofuranosidase precursor.
  
 
 0.809
yjmD_1
Putative zinc-type alcohol dehydrogenase-like protein YjmD.
  
 
 0.809
ulaF
L-ribulose-5-phosphate 4-epimerase UlaF.
   
 
 0.808
abf2
Intracellular exo-alpha-L-arabinofuranosidase 2; Involved in the degradation of arabinan and is a key enzyme in the complete degradation of the plant cell wall. Catalyzes the cleavage of terminal alpha-L-arabinofuranosyl residues in different hemicellulosic homopolysaccharides (branched and debranched arabinans) and heteropolysaccharides (arabinoxylans) (By similarity).
    
 0.807
xynD_2
Arabinoxylan arabinofuranohydrolase precursor.
  
 
  0.807
xynD_4
Arabinoxylan arabinofuranohydrolase precursor.
  
 
  0.807
xynD_6
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
  
 
  0.807
xynD_7
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
  
 
  0.807
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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