Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ46252.1 | ydjH_2 | Bovatus_01608 | Bovatus_03686 | Myo-inositol-1-phosphate synthase. | Putative sugar kinase YdjH. | 0.551 |
ALJ48291.1 | ydjH_2 | Bovatus_03685 | Bovatus_03686 | TonB-dependent Receptor Plug Domain protein. | Putative sugar kinase YdjH. | 0.438 |
ALJ48293.1 | ALJ48294.1 | Bovatus_03688 | Bovatus_03689 | Peptidase family S41. | Hypothetical protein. | 0.843 |
ALJ48293.1 | gyrA_2 | Bovatus_03688 | Bovatus_03690 | Peptidase family S41. | DNA gyrase subunit A. | 0.828 |
ALJ48293.1 | iolG_7 | Bovatus_03688 | Bovatus_03691 | Peptidase family S41. | Inositol 2-dehydrogenase. | 0.571 |
ALJ48293.1 | iolG_8 | Bovatus_03688 | Bovatus_03693 | Peptidase family S41. | Inositol 2-dehydrogenase. | 0.423 |
ALJ48293.1 | ydjH_2 | Bovatus_03688 | Bovatus_03686 | Peptidase family S41. | Putative sugar kinase YdjH. | 0.437 |
ALJ48294.1 | ALJ48293.1 | Bovatus_03689 | Bovatus_03688 | Hypothetical protein. | Peptidase family S41. | 0.843 |
ALJ48294.1 | gyrA_2 | Bovatus_03689 | Bovatus_03690 | Hypothetical protein. | DNA gyrase subunit A. | 0.839 |
ALJ48294.1 | iolG_7 | Bovatus_03689 | Bovatus_03691 | Hypothetical protein. | Inositol 2-dehydrogenase. | 0.578 |
ALJ48294.1 | iolG_8 | Bovatus_03689 | Bovatus_03693 | Hypothetical protein. | Inositol 2-dehydrogenase. | 0.419 |
ALJ48294.1 | ydjH_2 | Bovatus_03689 | Bovatus_03686 | Hypothetical protein. | Putative sugar kinase YdjH. | 0.425 |
gyrA_2 | ALJ48293.1 | Bovatus_03690 | Bovatus_03688 | DNA gyrase subunit A. | Peptidase family S41. | 0.828 |
gyrA_2 | ALJ48294.1 | Bovatus_03690 | Bovatus_03689 | DNA gyrase subunit A. | Hypothetical protein. | 0.839 |
gyrA_2 | iolG_7 | Bovatus_03690 | Bovatus_03691 | DNA gyrase subunit A. | Inositol 2-dehydrogenase. | 0.585 |
gyrA_2 | iolG_8 | Bovatus_03690 | Bovatus_03693 | DNA gyrase subunit A. | Inositol 2-dehydrogenase. | 0.429 |
gyrA_2 | ydjH_2 | Bovatus_03690 | Bovatus_03686 | DNA gyrase subunit A. | Putative sugar kinase YdjH. | 0.446 |
hisA | ydjH_2 | Bovatus_01413 | Bovatus_03686 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | Putative sugar kinase YdjH. | 0.488 |
iolG_7 | ALJ48293.1 | Bovatus_03691 | Bovatus_03688 | Inositol 2-dehydrogenase. | Peptidase family S41. | 0.571 |
iolG_7 | ALJ48294.1 | Bovatus_03691 | Bovatus_03689 | Inositol 2-dehydrogenase. | Hypothetical protein. | 0.578 |
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