Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ45801.1 | ALJ46396.1 | Bovatus_01150 | Bovatus_01756 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.462 |
ALJ45801.1 | ALJ48443.1 | Bovatus_01150 | Bovatus_03838 | Hypothetical protein. | Polyketide cyclase / dehydrase and lipid transport. | 0.708 |
ALJ45801.1 | ALJ49336.1 | Bovatus_01150 | Bovatus_04747 | Hypothetical protein. | Anaphase-promoting complex, cyclosome, subunit 3. | 0.722 |
ALJ45801.1 | qacR | Bovatus_01150 | Bovatus_03903 | Hypothetical protein. | HTH-type transcriptional regulator QacR. | 0.582 |
ALJ45801.1 | rplY | Bovatus_01150 | Bovatus_04780 | Hypothetical protein. | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.424 |
ALJ46396.1 | ALJ45801.1 | Bovatus_01756 | Bovatus_01150 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.462 |
ALJ46396.1 | ALJ48443.1 | Bovatus_01756 | Bovatus_03838 | Tetratricopeptide repeat protein. | Polyketide cyclase / dehydrase and lipid transport. | 0.661 |
ALJ46396.1 | ALJ49336.1 | Bovatus_01756 | Bovatus_04747 | Tetratricopeptide repeat protein. | Anaphase-promoting complex, cyclosome, subunit 3. | 0.751 |
ALJ46396.1 | lptD | Bovatus_01756 | Bovatus_03974 | Tetratricopeptide repeat protein. | LPS-assembly protein LptD. | 0.555 |
ALJ46396.1 | qacR | Bovatus_01756 | Bovatus_03903 | Tetratricopeptide repeat protein. | HTH-type transcriptional regulator QacR. | 0.538 |
ALJ48443.1 | ALJ45801.1 | Bovatus_03838 | Bovatus_01150 | Polyketide cyclase / dehydrase and lipid transport. | Hypothetical protein. | 0.708 |
ALJ48443.1 | ALJ46396.1 | Bovatus_03838 | Bovatus_01756 | Polyketide cyclase / dehydrase and lipid transport. | Tetratricopeptide repeat protein. | 0.661 |
ALJ48443.1 | ALJ49336.1 | Bovatus_03838 | Bovatus_04747 | Polyketide cyclase / dehydrase and lipid transport. | Anaphase-promoting complex, cyclosome, subunit 3. | 0.661 |
ALJ48443.1 | lptD | Bovatus_03838 | Bovatus_03974 | Polyketide cyclase / dehydrase and lipid transport. | LPS-assembly protein LptD. | 0.535 |
ALJ48443.1 | qacR | Bovatus_03838 | Bovatus_03903 | Polyketide cyclase / dehydrase and lipid transport. | HTH-type transcriptional regulator QacR. | 0.559 |
ALJ49336.1 | ALJ45801.1 | Bovatus_04747 | Bovatus_01150 | Anaphase-promoting complex, cyclosome, subunit 3. | Hypothetical protein. | 0.722 |
ALJ49336.1 | ALJ46396.1 | Bovatus_04747 | Bovatus_01756 | Anaphase-promoting complex, cyclosome, subunit 3. | Tetratricopeptide repeat protein. | 0.751 |
ALJ49336.1 | ALJ48443.1 | Bovatus_04747 | Bovatus_03838 | Anaphase-promoting complex, cyclosome, subunit 3. | Polyketide cyclase / dehydrase and lipid transport. | 0.661 |
ALJ49336.1 | lptD | Bovatus_04747 | Bovatus_03974 | Anaphase-promoting complex, cyclosome, subunit 3. | LPS-assembly protein LptD. | 0.741 |
ALJ49336.1 | qacR | Bovatus_04747 | Bovatus_03903 | Anaphase-promoting complex, cyclosome, subunit 3. | HTH-type transcriptional regulator QacR. | 0.614 |
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