STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ48800.1Bacterial membrane flanked domain protein. (165 aa)    
Predicted Functional Partners:
ALJ48799.1
Hypothetical protein.
       0.839
ALJ48802.1
Hypothetical protein.
       0.798
ALJ48801.1
Hypothetical protein.
       0.796
ALJ48798.1
Hypothetical protein.
       0.785
ALJ48803.1
Hypothetical protein.
       0.746
ALJ48797.1
Hypothetical protein.
       0.742
ALJ48804.1
Hypothetical protein.
       0.697
ALJ48796.1
Putative peptidase.
       0.667
ALJ48805.1
Hypothetical protein.
       0.495
mepM_3
Murein DD-endopeptidase MepM.
       0.482
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.