STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
endOF1_1Endo-beta-N-acetylglucosaminidase F1 precursor. (474 aa)    
Predicted Functional Partners:
ALJ48860.1
Hypothetical protein.
  
 0.958
ALJ48865.1
Hypothetical protein.
 
  
 0.861
ALJ48863.1
TonB-dependent Receptor Plug Domain protein.
 
  
 0.844
ALJ48862.1
Susd and RagB outer membrane lipoprotein.
 
  
 0.822
ALJ48861.1
Hypothetical protein.
  
    0.777
ALJ47940.1
Hypothetical protein.
   
 0.760
ALJ45943.1
Hypothetical protein.
 
   
 0.752
ALJ48450.1
Hypothetical protein.
 
   
 0.740
ALJ45940.1
TonB dependent receptor.
 
  
 0.739
ALJ45236.1
Hypothetical protein.
 
  
 0.707
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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