Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALJ48878.1 | lpxB | Bovatus_04284 | Bovatus_04288 | Hypothetical protein. | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.587 |
| ALJ48878.1 | mltD_1 | Bovatus_04284 | Bovatus_04283 | Hypothetical protein. | Membrane-bound lytic murein transglycosylase D precursor. | 0.787 |
| ALJ48878.1 | parB | Bovatus_04284 | Bovatus_04285 | Hypothetical protein. | Putative chromosome-partitioning protein ParB; Belongs to the ParB family. | 0.839 |
| ALJ48878.1 | soj_2 | Bovatus_04284 | Bovatus_04286 | Hypothetical protein. | Sporulation initiation inhibitor protein Soj. | 0.821 |
| ALJ48878.1 | spoT | Bovatus_04284 | Bovatus_04282 | Hypothetical protein. | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.682 |
| ALJ48878.1 | surE | Bovatus_04284 | Bovatus_04287 | Hypothetical protein. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.591 |
| lpxB | ALJ48878.1 | Bovatus_04288 | Bovatus_04284 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Hypothetical protein. | 0.587 |
| lpxB | mltD_1 | Bovatus_04288 | Bovatus_04283 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Membrane-bound lytic murein transglycosylase D precursor. | 0.611 |
| lpxB | parB | Bovatus_04288 | Bovatus_04285 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Putative chromosome-partitioning protein ParB; Belongs to the ParB family. | 0.587 |
| lpxB | ribBA | Bovatus_04288 | Bovatus_02397 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.404 |
| lpxB | soj_2 | Bovatus_04288 | Bovatus_04286 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Sporulation initiation inhibitor protein Soj. | 0.592 |
| lpxB | spoT | Bovatus_04288 | Bovatus_04282 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.400 |
| lpxB | surE | Bovatus_04288 | Bovatus_04287 | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.831 |
| mltD_1 | ALJ48878.1 | Bovatus_04283 | Bovatus_04284 | Membrane-bound lytic murein transglycosylase D precursor. | Hypothetical protein. | 0.787 |
| mltD_1 | lpxB | Bovatus_04283 | Bovatus_04288 | Membrane-bound lytic murein transglycosylase D precursor. | Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.611 |
| mltD_1 | parB | Bovatus_04283 | Bovatus_04285 | Membrane-bound lytic murein transglycosylase D precursor. | Putative chromosome-partitioning protein ParB; Belongs to the ParB family. | 0.785 |
| mltD_1 | soj_2 | Bovatus_04283 | Bovatus_04286 | Membrane-bound lytic murein transglycosylase D precursor. | Sporulation initiation inhibitor protein Soj. | 0.762 |
| mltD_1 | spoT | Bovatus_04283 | Bovatus_04282 | Membrane-bound lytic murein transglycosylase D precursor. | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.809 |
| mltD_1 | surE | Bovatus_04283 | Bovatus_04287 | Membrane-bound lytic murein transglycosylase D precursor. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.577 |
| parB | ALJ48878.1 | Bovatus_04285 | Bovatus_04284 | Putative chromosome-partitioning protein ParB; Belongs to the ParB family. | Hypothetical protein. | 0.839 |
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