STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yicI_12Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family. (714 aa)    
Predicted Functional Partners:
yicI_6
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
  
  
 
0.924
frlD
Fructosamine kinase FrlD.
  
 
 0.908
rbsK_2
Ribokinase.
  
 
 0.908
malQ
4-alpha-glucanotransferase.
    
 0.907
ALJ47056.1
Hexokinase.
   
 
 0.905
ALJ49129.1
Glycosyl hydrolase family 57.
    
 0.905
ALJ48413.1
Retaining alpha-galactosidase precursor.
    
  0.903
ALJ49360.1
Retaining alpha-galactosidase precursor.
    
  0.903
ALJ44681.1
Retaining alpha-galactosidase precursor.
    
  0.902
ALJ45617.1
Retaining alpha-galactosidase precursor.
    
  0.902
Your Current Organism:
Bacteroides ovatus
NCBI taxonomy Id: 28116
Other names: ATCC 8483, B. ovatus, BCRC 10623, Bacteroides fragilis subsp. ovatus, CCRC 10623, CCRC:10623, CCUG 4943, CIP 103756, JCM 5824, NCTC 11153, Pasteurella ovata, Pseudobacterium ovatum, bacterium NLAE-zl-C11, bacterium NLAE-zl-C34, bacterium NLAE-zl-C500, bacterium NLAE-zl-C57, bacterium NLAE-zl-H304, bacterium NLAE-zl-H361, bacterium NLAE-zl-H59, bacterium NLAE-zl-H73
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