Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ44735.1 | ALJ46547.1 | Bovatus_00063 | Bovatus_01907 | Helix-turn-helix domain protein. | DNA-binding transcriptional regulator MelR. | 0.624 |
ALJ44735.1 | ALJ49517.1 | Bovatus_00063 | Bovatus_04930 | Helix-turn-helix domain protein. | DNA-binding transcriptional regulator AraC. | 0.620 |
ALJ46547.1 | ALJ44735.1 | Bovatus_01907 | Bovatus_00063 | DNA-binding transcriptional regulator MelR. | Helix-turn-helix domain protein. | 0.624 |
ALJ46547.1 | ALJ47861.1 | Bovatus_01907 | Bovatus_03253 | DNA-binding transcriptional regulator MelR. | DNA-binding transcriptional regulator AraC. | 0.556 |
ALJ46547.1 | ALJ49517.1 | Bovatus_01907 | Bovatus_04930 | DNA-binding transcriptional regulator MelR. | DNA-binding transcriptional regulator AraC. | 0.761 |
ALJ46547.1 | araC_2 | Bovatus_01907 | Bovatus_02184 | DNA-binding transcriptional regulator MelR. | Arabinose operon regulatory protein. | 0.434 |
ALJ46547.1 | btr_1 | Bovatus_01907 | Bovatus_00340 | DNA-binding transcriptional regulator MelR. | HTH-type transcriptional activator Btr. | 0.522 |
ALJ46547.1 | melR | Bovatus_01907 | Bovatus_02036 | DNA-binding transcriptional regulator MelR. | Melibiose operon regulatory protein. | 0.435 |
ALJ46547.1 | rhaR_2 | Bovatus_01907 | Bovatus_01167 | DNA-binding transcriptional regulator MelR. | HTH-type transcriptional activator RhaR. | 0.557 |
ALJ46547.1 | yesS_3 | Bovatus_01907 | Bovatus_02857 | DNA-binding transcriptional regulator MelR. | HTH-type transcriptional regulator YesS. | 0.521 |
ALJ47861.1 | ALJ46547.1 | Bovatus_03253 | Bovatus_01907 | DNA-binding transcriptional regulator AraC. | DNA-binding transcriptional regulator MelR. | 0.556 |
ALJ47861.1 | ALJ49517.1 | Bovatus_03253 | Bovatus_04930 | DNA-binding transcriptional regulator AraC. | DNA-binding transcriptional regulator AraC. | 0.505 |
ALJ49517.1 | ALJ44735.1 | Bovatus_04930 | Bovatus_00063 | DNA-binding transcriptional regulator AraC. | Helix-turn-helix domain protein. | 0.620 |
ALJ49517.1 | ALJ46547.1 | Bovatus_04930 | Bovatus_01907 | DNA-binding transcriptional regulator AraC. | DNA-binding transcriptional regulator MelR. | 0.761 |
ALJ49517.1 | ALJ47861.1 | Bovatus_04930 | Bovatus_03253 | DNA-binding transcriptional regulator AraC. | DNA-binding transcriptional regulator AraC. | 0.505 |
ALJ49517.1 | ALJ49518.1 | Bovatus_04930 | Bovatus_04931 | DNA-binding transcriptional regulator AraC. | Hypothetical protein. | 0.581 |
ALJ49517.1 | araC_2 | Bovatus_04930 | Bovatus_02184 | DNA-binding transcriptional regulator AraC. | Arabinose operon regulatory protein. | 0.506 |
ALJ49517.1 | btr_1 | Bovatus_04930 | Bovatus_00340 | DNA-binding transcriptional regulator AraC. | HTH-type transcriptional activator Btr. | 0.519 |
ALJ49517.1 | melR | Bovatus_04930 | Bovatus_02036 | DNA-binding transcriptional regulator AraC. | Melibiose operon regulatory protein. | 0.527 |
ALJ49517.1 | rhaR_2 | Bovatus_04930 | Bovatus_01167 | DNA-binding transcriptional regulator AraC. | HTH-type transcriptional activator RhaR. | 0.537 |
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