Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC | aroF | Bovatus_02129 | Bovatus_04051 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.996 |
| aroC | entC | Bovatus_02129 | Bovatus_04933 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Isochorismate synthase EntC. | 0.902 |
| aroC | hisC_1 | Bovatus_02129 | Bovatus_00097 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.653 |
| aroC | trpE | Bovatus_02129 | Bovatus_01217 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component 1. | 0.952 |
| aroC | trpG | Bovatus_02129 | Bovatus_01218 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component 2. | 0.958 |
| aroF | aroC | Bovatus_04051 | Bovatus_02129 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.996 |
| aroF | entC | Bovatus_04051 | Bovatus_04933 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Isochorismate synthase EntC. | 0.898 |
| aroF | trpE | Bovatus_04051 | Bovatus_01217 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Anthranilate synthase component 1. | 0.939 |
| aroF | trpG | Bovatus_04051 | Bovatus_01218 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Anthranilate synthase component 2. | 0.951 |
| entC | aroC | Bovatus_04933 | Bovatus_02129 | Isochorismate synthase EntC. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.902 |
| entC | aroF | Bovatus_04933 | Bovatus_04051 | Isochorismate synthase EntC. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.898 |
| entC | hisC_1 | Bovatus_04933 | Bovatus_00097 | Isochorismate synthase EntC. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.812 |
| entC | menB | Bovatus_04933 | Bovatus_04935 | Isochorismate synthase EntC. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). | 0.974 |
| entC | menD | Bovatus_04933 | Bovatus_04934 | Isochorismate synthase EntC. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.997 |
| entC | menE | Bovatus_04933 | Bovatus_04937 | Isochorismate synthase EntC. | 2-succinylbenzoate--CoA ligase. | 0.914 |
| entC | trpE | Bovatus_04933 | Bovatus_01217 | Isochorismate synthase EntC. | Anthranilate synthase component 1. | 0.895 |
| entC | trpG | Bovatus_04933 | Bovatus_01218 | Isochorismate synthase EntC. | Anthranilate synthase component 2. | 0.942 |
| entC | yidA_2 | Bovatus_04933 | Bovatus_04932 | Isochorismate synthase EntC. | Sugar phosphatase YidA. | 0.909 |
| entC | ykfB | Bovatus_04933 | Bovatus_04936 | Isochorismate synthase EntC. | L-Ala-D/L-Glu epimerase. | 0.924 |
| hisC_1 | aroC | Bovatus_00097 | Bovatus_02129 | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.653 |
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