Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ47649.1 | ALJ48551.1 | Bovatus_03041 | Bovatus_03954 | Hypothetical protein. | Hypothetical protein. | 0.581 |
ALJ47649.1 | ALJ48639.1 | Bovatus_03041 | Bovatus_04044 | Hypothetical protein. | Hypothetical protein. | 0.641 |
ALJ47649.1 | ALJ48887.1 | Bovatus_03041 | Bovatus_04294 | Hypothetical protein. | Hypothetical protein. | 0.668 |
ALJ47649.1 | menD | Bovatus_03041 | Bovatus_04934 | Hypothetical protein. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.417 |
ALJ47649.1 | ykfB | Bovatus_03041 | Bovatus_04936 | Hypothetical protein. | L-Ala-D/L-Glu epimerase. | 0.582 |
ALJ48551.1 | ALJ47649.1 | Bovatus_03954 | Bovatus_03041 | Hypothetical protein. | Hypothetical protein. | 0.581 |
ALJ48551.1 | ALJ48639.1 | Bovatus_03954 | Bovatus_04044 | Hypothetical protein. | Hypothetical protein. | 0.745 |
ALJ48551.1 | ALJ48887.1 | Bovatus_03954 | Bovatus_04294 | Hypothetical protein. | Hypothetical protein. | 0.711 |
ALJ48551.1 | ykfB | Bovatus_03954 | Bovatus_04936 | Hypothetical protein. | L-Ala-D/L-Glu epimerase. | 0.507 |
ALJ48639.1 | ALJ47649.1 | Bovatus_04044 | Bovatus_03041 | Hypothetical protein. | Hypothetical protein. | 0.641 |
ALJ48639.1 | ALJ48551.1 | Bovatus_04044 | Bovatus_03954 | Hypothetical protein. | Hypothetical protein. | 0.745 |
ALJ48639.1 | ykfB | Bovatus_04044 | Bovatus_04936 | Hypothetical protein. | L-Ala-D/L-Glu epimerase. | 0.662 |
ALJ48887.1 | ALJ47649.1 | Bovatus_04294 | Bovatus_03041 | Hypothetical protein. | Hypothetical protein. | 0.668 |
ALJ48887.1 | ALJ48551.1 | Bovatus_04294 | Bovatus_03954 | Hypothetical protein. | Hypothetical protein. | 0.711 |
ALJ48887.1 | menE | Bovatus_04294 | Bovatus_04937 | Hypothetical protein. | 2-succinylbenzoate--CoA ligase. | 0.495 |
ALJ48887.1 | ykfB | Bovatus_04294 | Bovatus_04936 | Hypothetical protein. | L-Ala-D/L-Glu epimerase. | 0.521 |
entC | menA | Bovatus_04933 | Bovatus_01956 | Isochorismate synthase EntC. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.691 |
entC | menB | Bovatus_04933 | Bovatus_04935 | Isochorismate synthase EntC. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). | 0.974 |
entC | menD | Bovatus_04933 | Bovatus_04934 | Isochorismate synthase EntC. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.997 |
entC | menE | Bovatus_04933 | Bovatus_04937 | Isochorismate synthase EntC. | 2-succinylbenzoate--CoA ligase. | 0.914 |
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