STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKY94699.1DUF4924 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
OKY94938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
OKY93389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
OKY93573.1
3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
OKY96869.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.735
OKY94452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.720
OKY96866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.711
OKY94405.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
OKY96207.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
OKY93669.1
DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
  
     0.687
OKY93667.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
Your Current Organism:
Alistipes putredinis
NCBI taxonomy Id: 28117
Other names: A. putredinis, ATCC 29800, Bacillus putredinis, Bacteroides putredinis, CCUG 45780, CIP 104286, DSM 17216, JCM 16772, Pseudobacterium putredinis, Ristella putredinis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.