STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKY93137.1Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology. (666 aa)    
Predicted Functional Partners:
OKY93036.1
Conjugative transposon protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.785
OKY93037.1
Conjugative transposon protein TraM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.785
OKY93038.1
Conjugative transposon protein TraK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.785
OKY93039.1
Conjugative transposon protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
OKY93135.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.783
OKY93133.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.782
OKY93179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.780
OKY93136.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.780
BHV66_09945
Conjugal transfer protein TraG; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
OKY93040.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
Your Current Organism:
Alistipes putredinis
NCBI taxonomy Id: 28117
Other names: A. putredinis, ATCC 29800, Bacillus putredinis, Bacteroides putredinis, CCUG 45780, CIP 104286, DSM 17216, JCM 16772, Pseudobacterium putredinis, Ristella putredinis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.