Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ47813.1 | SJZ51938.1 | SAMN02745108_00707 | SAMN02745108_00840 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | Radical SAM-linked protein/radical SAM family uncharacterized protein. | 0.410 |
SJZ51918.1 | SJZ51938.1 | SAMN02745108_00839 | SAMN02745108_00840 | Flavorubredoxin. | Radical SAM-linked protein/radical SAM family uncharacterized protein. | 0.802 |
SJZ51918.1 | SJZ51991.1 | SAMN02745108_00839 | SAMN02745108_00841 | Flavorubredoxin. | Holin-like protein. | 0.544 |
SJZ51918.1 | SJZ52008.1 | SAMN02745108_00839 | SAMN02745108_00842 | Flavorubredoxin. | TIGR00659 family protein. | 0.544 |
SJZ51938.1 | SJZ47813.1 | SAMN02745108_00840 | SAMN02745108_00707 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.410 |
SJZ51938.1 | SJZ51918.1 | SAMN02745108_00840 | SAMN02745108_00839 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | Flavorubredoxin. | 0.802 |
SJZ51938.1 | SJZ51991.1 | SAMN02745108_00840 | SAMN02745108_00841 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | Holin-like protein. | 0.572 |
SJZ51938.1 | SJZ52008.1 | SAMN02745108_00840 | SAMN02745108_00842 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | TIGR00659 family protein. | 0.554 |
SJZ51938.1 | SJZ56168.1 | SAMN02745108_00840 | SAMN02745108_00957 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. | 0.433 |
SJZ51938.1 | SJZ97445.1 | SAMN02745108_00840 | SAMN02745108_02124 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | 4-hydroxybenzoate polyprenyltransferase. | 0.503 |
SJZ51938.1 | SKA10026.1 | SAMN02745108_00840 | SAMN02745108_02515 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | UDP-N-acetylmuramate--alanine ligase. | 0.420 |
SJZ51938.1 | murB | SAMN02745108_00840 | SAMN02745108_02497 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.462 |
SJZ51938.1 | murC | SAMN02745108_00840 | SAMN02745108_02311 | Radical SAM-linked protein/radical SAM family uncharacterized protein. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.420 |
SJZ51991.1 | SJZ51918.1 | SAMN02745108_00841 | SAMN02745108_00839 | Holin-like protein. | Flavorubredoxin. | 0.544 |
SJZ51991.1 | SJZ51938.1 | SAMN02745108_00841 | SAMN02745108_00840 | Holin-like protein. | Radical SAM-linked protein/radical SAM family uncharacterized protein. | 0.572 |
SJZ51991.1 | SJZ52008.1 | SAMN02745108_00841 | SAMN02745108_00842 | Holin-like protein. | TIGR00659 family protein. | 0.995 |
SJZ52008.1 | SJZ51918.1 | SAMN02745108_00842 | SAMN02745108_00839 | TIGR00659 family protein. | Flavorubredoxin. | 0.544 |
SJZ52008.1 | SJZ51938.1 | SAMN02745108_00842 | SAMN02745108_00840 | TIGR00659 family protein. | Radical SAM-linked protein/radical SAM family uncharacterized protein. | 0.554 |
SJZ52008.1 | SJZ51991.1 | SAMN02745108_00842 | SAMN02745108_00841 | TIGR00659 family protein. | Holin-like protein. | 0.995 |
SJZ56168.1 | SJZ51938.1 | SAMN02745108_00957 | SAMN02745108_00840 | 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. | Radical SAM-linked protein/radical SAM family uncharacterized protein. | 0.433 |
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