STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ55916.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SJZ55932.1
Rod shape-determining protein MreB.
       0.598
SJZ55943.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
       0.562
SJZ55961.1
Rod shape-determining protein MreD.
       0.562
SJZ55982.1
Peptidoglycan glycosyltransferase.
       0.562
SJZ56029.1
Rod shape determining protein RodA; Belongs to the SEDS family.
       0.562
SJZ55894.1
Hypothetical protein.
       0.549
Your Current Organism:
Fibrobacter intestinalis
NCBI taxonomy Id: 28122
Other names: ATCC 43854, F. intestinalis, Fibribacter intestinalis, strain NR9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.