STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ61947.1Glycosyltransferase, GT2 family. (322 aa)    
Predicted Functional Partners:
SKA01862.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.937
SJZ45719.1
Hypothetical protein.
  
     0.773
SJZ61935.1
Concanavalin A-like lectin/glucanases superfamily protein.
       0.592
SJZ61916.1
Hypothetical protein.
 
     0.534
SJZ94489.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.521
SKA11070.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
  
 
 0.476
SJZ97903.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.474
SJZ94436.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.442
SKA01984.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
  0.428
SJZ36254.1
Lipopolysaccharide transport system permease protein.
  
  
 0.420
Your Current Organism:
Fibrobacter intestinalis
NCBI taxonomy Id: 28122
Other names: ATCC 43854, F. intestinalis, Fibribacter intestinalis, strain NR9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.