Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ39005.1 | SJZ39613.1 | SAMN02745108_00369 | SAMN02745108_00415 | Ig-like domain-containing protein. | UDP-2,3-diacylglucosamine hydrolase. | 0.728 |
SJZ39005.1 | SJZ65186.1 | SAMN02745108_00369 | SAMN02745108_01235 | Ig-like domain-containing protein. | Phosphomannomutase. | 0.615 |
SJZ39613.1 | SJZ39005.1 | SAMN02745108_00415 | SAMN02745108_00369 | UDP-2,3-diacylglucosamine hydrolase. | Ig-like domain-containing protein. | 0.728 |
SJZ39613.1 | SJZ65186.1 | SAMN02745108_00415 | SAMN02745108_01235 | UDP-2,3-diacylglucosamine hydrolase. | Phosphomannomutase. | 0.614 |
SJZ39613.1 | SJZ96895.1 | SAMN02745108_00415 | SAMN02745108_02111 | UDP-2,3-diacylglucosamine hydrolase. | Glucose-1-phosphate thymidylyltransferase. | 0.453 |
SJZ41364.1 | SJZ65186.1 | SAMN02745108_00488 | SAMN02745108_01235 | ADP-sugar diphosphatase. | Phosphomannomutase. | 0.690 |
SJZ41364.1 | SJZ82932.1 | SAMN02745108_00488 | SAMN02745108_01720 | ADP-sugar diphosphatase. | NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins. | 0.589 |
SJZ41364.1 | SJZ94489.1 | SAMN02745108_00488 | SAMN02745108_02036 | ADP-sugar diphosphatase. | Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.725 |
SJZ44332.1 | SJZ65186.1 | SAMN02745108_00591 | SAMN02745108_01235 | Regulatory protein, gntR family. | Phosphomannomutase. | 0.752 |
SJZ44332.1 | glmS | SAMN02745108_00591 | SAMN02745108_01234 | Regulatory protein, gntR family. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.400 |
SJZ65153.1 | SJZ65186.1 | SAMN02745108_01233 | SAMN02745108_01235 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Phosphomannomutase. | 0.700 |
SJZ65153.1 | glmS | SAMN02745108_01233 | SAMN02745108_01234 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.784 |
SJZ65186.1 | SJZ39005.1 | SAMN02745108_01235 | SAMN02745108_00369 | Phosphomannomutase. | Ig-like domain-containing protein. | 0.615 |
SJZ65186.1 | SJZ39613.1 | SAMN02745108_01235 | SAMN02745108_00415 | Phosphomannomutase. | UDP-2,3-diacylglucosamine hydrolase. | 0.614 |
SJZ65186.1 | SJZ41364.1 | SAMN02745108_01235 | SAMN02745108_00488 | Phosphomannomutase. | ADP-sugar diphosphatase. | 0.690 |
SJZ65186.1 | SJZ44332.1 | SAMN02745108_01235 | SAMN02745108_00591 | Phosphomannomutase. | Regulatory protein, gntR family. | 0.752 |
SJZ65186.1 | SJZ65153.1 | SAMN02745108_01235 | SAMN02745108_01233 | Phosphomannomutase. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.700 |
SJZ65186.1 | SJZ82932.1 | SAMN02745108_01235 | SAMN02745108_01720 | Phosphomannomutase. | NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins. | 0.619 |
SJZ65186.1 | SJZ94489.1 | SAMN02745108_01235 | SAMN02745108_02036 | Phosphomannomutase. | Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.838 |
SJZ65186.1 | SJZ96895.1 | SAMN02745108_01235 | SAMN02745108_02111 | Phosphomannomutase. | Glucose-1-phosphate thymidylyltransferase. | 0.602 |
page 1 of 2