STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ74344.1Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). Belongs to the DapA family. (318 aa)    
Predicted Functional Partners:
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.964
SJZ54317.1
4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family.
  
 
 0.938
SJZ94732.1
Chorismate mutase.
  
  
 0.869
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
  
 0.844
SJZ46218.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.842
SJZ46309.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.842
SJZ46329.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.842
SJZ46419.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.842
SJZ46454.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.842
SJZ47209.1
Hypothetical protein.
  
 
 0.842
Your Current Organism:
Fibrobacter intestinalis
NCBI taxonomy Id: 28122
Other names: ATCC 43854, F. intestinalis, Fibribacter intestinalis, strain NR9
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