STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ97058.1Surface antigen. (426 aa)    
Predicted Functional Partners:
SJZ55741.1
Tetratricopeptide repeat-containing protein.
  
 
 0.870
SJZ55652.1
Tetratricopeptide repeat-containing protein.
  
    0.779
SJZ47840.1
Hypothetical protein.
  
     0.772
SKA15518.1
Glycoside hydrolase family 44.
  
     0.772
SKA15863.1
Fibro-slime domain-containing protein.
  
     0.772
SJZ51854.1
Hypothetical protein.
  
     0.770
SJZ41735.1
Hypothetical protein.
  
     0.769
SKA17872.1
Glycosyl hydrolase family 9.
  
     0.767
SKA20797.1
Hypothetical protein.
  
     0.767
SJZ93703.1
AAA domain-containing protein.
  
     0.765
Your Current Organism:
Fibrobacter intestinalis
NCBI taxonomy Id: 28122
Other names: ATCC 43854, F. intestinalis, Fibribacter intestinalis, strain NR9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.