STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO18128.1Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (246 aa)    
Predicted Functional Partners:
KXO15899.1
KEGG: pmz:HMPREF0659_A5662 9.1e-254 respiratory-chain NADH dehydrogenase, 49 Kd subunit; K13378 NADH-quinone oxidoreductase subunit C/D; Psort location: Cytoplasmic, score: 9.97.
   
   0.978
KXO18381.1
Hsp90 protein; KEGG: eci:UTI89_C0501 1.6e-64 htpG; heat shock protein 90 K04079; Psort location: Cytoplasmic, score: 9.97.
  
 0.936
KXO18127.1
DnaJ domain protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.881
KXO17926.1
Cold-shock DEAD-box protein A family protein; KEGG: pmr:PMI3424 3.8e-81 deaD; ATP-dependent RNA helicase DeaD K05592; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family.
 
 0.865
KXO17856.1
KEGG: phe:Phep_1011 6.3e-88 DEAD/DEAH box helicase; K05591 ATP-independent RNA helicase DbpA; Psort location: Cytoplasmic, score: 9.97.
 
 0.856
KXO17390.1
KEGG: pdn:HMPREF9137_0656 4.0e-283 putative cold-shock DEAD-box protein A; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97.
  
 0.838
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
 
 
 0.773
KXO14719.1
O-succinylbenzoic acid--CoA ligase family protein; KEGG: pit:PIN17_A1102 4.8e-113 AMP-binding enzyme domain protein; K01911 O-succinylbenzoic acid--CoA ligase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.768
KXO15218.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.763
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.759
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.