STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO17581.1KEGG: pdn:HMPREF9137_0601 7.7e-122 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240; Psort location: Cytoplasmic, score: 8.96. (251 aa)    
Predicted Functional Partners:
KXO17582.1
KEGG: pdn:HMPREF9137_0600 0. sdhA; succinate dehydrogenase flavoprotein subunit K00239; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.999
KXO17583.1
Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: bhl:Bache_0807 6.1e-74 succinate dehydrogenase subunit C K00241; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.999
KXO15899.1
KEGG: pmz:HMPREF0659_A5662 9.1e-254 respiratory-chain NADH dehydrogenase, 49 Kd subunit; K13378 NADH-quinone oxidoreductase subunit C/D; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.999
KXO17335.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 0.991
KXO17674.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.982
sucD
succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 0.977
sucC
succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 0.962
KXO17943.1
Aminotransferase, class I/II; KEGG: pmz:HMPREF0659_A6793 8.1e-182 aminotransferase, class I/II K00812; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.881
KXO16394.1
KEGG: pmz:HMPREF0659_A5283 1.2e-148 lactate/malate dehydrogenase, NAD binding domain protein; K00024 malate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the LDH/MDH superfamily.
  
 0.818
KXO16659.1
KEGG: pdn:HMPREF9137_0394 6.0e-186 glpC; glycerol-3-phosphate dehydrogenase K00113; Psort location: CytoplasmicMembrane, score: 7.88.
   
  0.793
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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