STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO17484.1Hypothetical protein; KEGG: pfe:PSF113_0949 2.0e-23 yrbE; protein YrbE K02066; Psort location: CytoplasmicMembrane, score: 10.00. (248 aa)    
Predicted Functional Partners:
KXO17483.1
ABC transporter, ATP-binding protein; KEGG: bsa:Bacsa_3063 1.3e-89 Phosphonate-transporting ATPase K02065; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.999
KXO18242.1
Hypothetical protein; KEGG: bba:Bd3413 0.00029 ABC transporter substrate binding protein K02067.
 
 0.997
KXO17485.1
KEGG: pmz:HMPREF0659_A6183 2.0e-132 lptB; lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861; Psort location: Cytoplasmic, score: 9.12.
 
  
  0.857
KXO18315.1
KEGG: oih:OB1405 2.7e-55 ABC transporter ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.553
KXO17431.1
ABC transporter, ATP-binding protein; KEGG: pdn:HMPREF9137_0532 2.4e-285 putative lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.553
KXO16109.1
Hypothetical protein; KEGG: thg:TCELL_0041 0.0011 peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type.
  
   0.553
KXO15601.1
ABC transporter, ATP-binding protein; KEGG: pah:Poras_1381 1.8e-145 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.553
KXO15602.1
ABC transporter, ATP-binding protein; KEGG: pah:Poras_1335 1.2e-134 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.553
KXO15481.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A0188 4.0e-86 ABC transporter K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.553
KXO15482.1
ABC transporter, ATP-binding protein; KEGG: bsa:Bacsa_1722 1.5e-88 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.553
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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