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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO16329.1KEGG: cfu:CFU_3425 1.6e-11 vsrD; LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96. (214 aa)    
Predicted Functional Partners:
KXO14845.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cyp:PCC8801_1715 1.0e-15 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.931
KXO17318.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 2.6e-07 protein-glutamate methylesterase; Psort location: Cytoplasmic, score: 8.96.
  
     0.769
KXO17704.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bvu:BVU_4096 5.9e-92 two-component system sensor histidine kinase; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.758
KXO17317.1
Hemerythrin HHE cation binding domain protein; KEGG: fal:FRAAL1304 7.5e-07 protein-glutamate methylesterase; Psort location: Cytoplasmic, score: 8.96.
 
     0.758
KXO16089.1
Sigma-54 interaction domain protein; KEGG: reh:H16_B0538 8.3e-61 poxR; phenol-degradative gene activator K01529; Psort location: Cytoplasmic, score: 9.97.
  
 0.692
KXO16330.1
Hypothetical protein.
       0.605
KXO17518.1
KEGG: cyb:CYB_1515 7.4e-07 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
    
 0.587
KXO17563.1
Tetratricopeptide repeat protein; KEGG: apb:SAR116_1534 5.4e-06 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.523
KXO14835.1
Tetratricopeptide repeat protein; KEGG: hmg:100201589 5.0e-07 similar to predicted protein; K09667 polypeptide N-acetylglucosaminyltransferase.
    
  0.518
KXO14677.1
Tetratricopeptide repeat domain protein; KEGG: ccm:Ccan_18230 1.7e-92 PIF1/RRM3 DNA helicase-like protein; Psort location: Cytoplasmic, score: 8.96.
    
  0.518
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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