STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
folEKEGG: pit:PIN17_A1905 2.6e-91 folE; GTP cyclohydrolase I K01495; Psort location: Cytoplasmic, score: 9.97. (197 aa)    
Predicted Functional Partners:
KXO18415.1
Dihydropteroate synthase; KEGG: pmz:HMPREF0659_A6211 6.3e-104 folP; dihydropteroate synthase K00796; Psort location: Cytoplasmic, score: 9.97.
 
 0.983
KXO15669.1
Putative queuosine biosynthesis protein QueD; KEGG: pah:Poras_1677 1.3e-46 hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.949
KXO18244.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
 
 
 0.945
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.934
KXO17880.1
KEGG: pdn:HMPREF9137_1082 3.0e-42 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950; Psort location: Cytoplasmic, score: 9.97.
  
 0.933
KXO15680.1
Pyruvate kinase; KEGG: pmz:HMPREF0659_A6470 8.9e-192 pyk; pyruvate kinase K00873; Belongs to the pyruvate kinase family.
    
  0.879
KXO16116.1
Sporulation and cell division repeat protein.
  
    0.807
KXO18456.1
KEGG: pit:PIN17_A0657 7.1e-112 ribD; riboflavin biosynthesis protein RibD K11752; Psort location: Cytoplasmic, score: 9.97.
    
 0.787
KXO16083.1
Dinuclear metal center protein, YbgI family; KEGG: hip:CGSHiEE_02770 1.0e-08 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
    
 0.782
KXO16119.1
Exodeoxyribonuclease III; KEGG: pdn:HMPREF9137_1054 5.5e-121 xth; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.97.
  
    0.764
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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