Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXO15168.1 | KXO15181.1 | HMPREF3202_01989 | HMPREF3202_02002 | RteC protein. | Hypothetical protein. | 0.610 |
KXO15168.1 | KXO15468.1 | HMPREF3202_01989 | HMPREF3202_01695 | RteC protein. | Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. | 0.571 |
KXO15168.1 | KXO15471.1 | HMPREF3202_01989 | HMPREF3202_01698 | RteC protein. | Hypothetical protein. | 0.649 |
KXO15168.1 | KXO15473.1 | HMPREF3202_01989 | HMPREF3202_01700 | RteC protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.611 |
KXO15181.1 | KXO15168.1 | HMPREF3202_02002 | HMPREF3202_01989 | Hypothetical protein. | RteC protein. | 0.610 |
KXO15181.1 | KXO15471.1 | HMPREF3202_02002 | HMPREF3202_01698 | Hypothetical protein. | Hypothetical protein. | 0.600 |
KXO15181.1 | KXO17335.1 | HMPREF3202_02002 | HMPREF3202_01194 | Hypothetical protein. | Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96. | 0.418 |
KXO15468.1 | KXO15168.1 | HMPREF3202_01695 | HMPREF3202_01989 | Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. | RteC protein. | 0.571 |
KXO15468.1 | KXO15471.1 | HMPREF3202_01695 | HMPREF3202_01698 | Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.611 |
KXO15468.1 | KXO17335.1 | HMPREF3202_01695 | HMPREF3202_01194 | Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. | Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96. | 0.418 |
KXO15470.1 | KXO15471.1 | HMPREF3202_01697 | HMPREF3202_01698 | DNA binding domain, excisionase family; KEGG: tsu:Tresu_1607 0.0031 PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein. | 0.921 |
KXO15470.1 | KXO15472.1 | HMPREF3202_01697 | HMPREF3202_01699 | DNA binding domain, excisionase family; KEGG: tsu:Tresu_1607 0.0031 PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein. | 0.651 |
KXO15470.1 | KXO15473.1 | HMPREF3202_01697 | HMPREF3202_01700 | DNA binding domain, excisionase family; KEGG: tsu:Tresu_1607 0.0031 PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.813 |
KXO15470.1 | KXO15474.1 | HMPREF3202_01697 | HMPREF3202_01701 | DNA binding domain, excisionase family; KEGG: tsu:Tresu_1607 0.0031 PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein. | 0.601 |
KXO15470.1 | KXO17335.1 | HMPREF3202_01697 | HMPREF3202_01194 | DNA binding domain, excisionase family; KEGG: tsu:Tresu_1607 0.0031 PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component; Psort location: Cytoplasmic, score: 8.96. | Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96. | 0.655 |
KXO15471.1 | KXO15168.1 | HMPREF3202_01698 | HMPREF3202_01989 | Hypothetical protein. | RteC protein. | 0.649 |
KXO15471.1 | KXO15181.1 | HMPREF3202_01698 | HMPREF3202_02002 | Hypothetical protein. | Hypothetical protein. | 0.600 |
KXO15471.1 | KXO15468.1 | HMPREF3202_01698 | HMPREF3202_01695 | Hypothetical protein. | Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. | 0.611 |
KXO15471.1 | KXO15470.1 | HMPREF3202_01698 | HMPREF3202_01697 | Hypothetical protein. | DNA binding domain, excisionase family; KEGG: tsu:Tresu_1607 0.0031 PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component; Psort location: Cytoplasmic, score: 8.96. | 0.921 |
KXO15471.1 | KXO15472.1 | HMPREF3202_01698 | HMPREF3202_01699 | Hypothetical protein. | Hypothetical protein. | 0.773 |
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