Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXO15419.1Putative glycogen debranching enzyme, type; KEGG: ccm:Ccan_04120 2.0e-139 putative 4-alpha-glucanotransferase and amylo-alpha-1,6-glucosidase; Psort location: Cytoplasmic, score: 8.96. (664 aa)    
Predicted Functional Partners:
KXO15420.1
KEGG: pdn:HMPREF9137_1479 3.6e-211 glycosyltransferase group 1 family protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.963
KXO15421.1
KEGG: pmz:HMPREF0659_A5929 5.4e-185 glycosyl hydrolase, family 57; K07405 alpha-amylase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.933
KXO17522.1
KEGG: pdn:HMPREF9137_0463 0. glgP; alpha-glucan phosphorylase K00688; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.926
KXO17849.1
KEGG: pmz:HMPREF0659_A6687 0. alpha amylase, catalytic domain protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.920
KXO17523.1
Starch synthase; KEGG: pru:PRU_0670 7.8e-193 glycogen synthase family protein.
 
 
 0.703
KXO16083.1
Dinuclear metal center protein, YbgI family; KEGG: hip:CGSHiEE_02770 1.0e-08 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
    
   0.600
KXO17910.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.509
pheS
KEGG: pmz:HMPREF0659_A6527 2.8e-172 pheS; phenylalanine--tRNA ligase, alpha subunit K01889; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.427
KXO18451.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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