STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO15402.1KEGG: pdn:HMPREF9137_1160 4.3e-224 cydA; cytochrome D ubiquinol oxidase subunit I K00425; Psort location: CytoplasmicMembrane, score: 10.00. (511 aa)    
Predicted Functional Partners:
KXO15403.1
KEGG: pmz:HMPREF0659_A5785 1.9e-173 putative cytochrome D ubiquinol oxidase, subunit II; K00426 cytochrome d ubiquinol oxidase subunit II; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
KXO15401.1
Hypothetical protein.
 
     0.828
KXO17582.1
KEGG: pdn:HMPREF9137_0600 0. sdhA; succinate dehydrogenase flavoprotein subunit K00239; Psort location: CytoplasmicMembrane, score: 7.88.
     
 0.621
KXO17581.1
KEGG: pdn:HMPREF9137_0601 7.7e-122 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240; Psort location: Cytoplasmic, score: 8.96.
     
 0.602
KXO16657.1
KEGG: pdn:HMPREF9137_0396 4.5e-213 glpA; glycerol-3-phosphate dehydrogenase K00111; Psort location: Cytoplasmic, score: 9.12; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.551
KXO15399.1
Auxiliary transport protein, membrane fusion protein family protein; KEGG: pfe:PSF113_5667 1.1e-10 secretion protein family protein K01993.
       0.534
KXO16659.1
KEGG: pdn:HMPREF9137_0394 6.0e-186 glpC; glycerol-3-phosphate dehydrogenase K00113; Psort location: CytoplasmicMembrane, score: 7.88.
    
 0.519
KXO17583.1
Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: bhl:Bache_0807 6.1e-74 succinate dehydrogenase subunit C K00241; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.499
KXO15398.1
Hypothetical protein; KEGG: mok:Metok_0336 0.0078 NADH dehydrogenase (quinone) K12137; Psort location: CytoplasmicMembrane, score: 10.00.
       0.479
KXO15397.1
ABC-2 type transporter; KEGG: phu:Phum_PHUM433630 2.9e-08 ABC transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00.
       0.454
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.