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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO15190.1Hypothetical protein; KEGG: mas:Mahau_0988 7.6e-12 Ser/Thr phosphatase; K01090 protein phosphatase; Psort location: Cytoplasmic, score: 8.96. (211 aa)    
Predicted Functional Partners:
KXO17580.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5050 4.1e-116 hypothetical protein; K08884 serine/threonine protein kinase, bacterial.
 
 0.964
KXO15189.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.909
KXO15188.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.903
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
   
 0.886
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.769
KXO14858.1
KEGG: pmz:HMPREF0659_A6685 2.6e-153 prs; ribose-phosphate diphosphokinase K00948; Psort location: Cytoplasmic, score: 9.97.
    
 0.769
KXO17599.1
Channel protein, MIP family; KEGG: hiq:CGSHiGG_06740 7.1e-25 glpQ; glycerophosphodiester phosphodiesterase K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.758
KXO14420.1
PASTA domain protein; KEGG: fba:FIC_00311 1.6e-14 hypothetical protein; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.739
KXO17927.1
KEGG: pdn:HMPREF9137_0196 9.2e-119 putative pantothenate kinase; K09680 type II pantothenate kinase; Psort location: CytoplasmicMembrane, score: 9.82.
    
   0.674
KXO18127.1
DnaJ domain protein; Psort location: CytoplasmicMembrane, score: 9.82.
   
   0.670
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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