Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
KXO15094.1Hypothetical protein; KEGG: pha:PSHAa0816 0.00020 partitioning protein A K03496; Psort location: Cytoplasmic, score: 8.96. (238 aa)    
Predicted Functional Partners:
KXO15105.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.807
KXO15101.1
Conjugation system ATPase, TraG family; KEGG: fnu:FN0522 0.00016 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96.
 
     0.804
KXO15108.1
Conjugative transposon TraM protein.
 
     0.799
KXO15109.1
Conjugative transposon TraN protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.798
KXO15095.1
Hypothetical protein.
       0.784
KXO15096.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.777
KXO15112.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.16.
 
     0.771
KXO15093.1
Hypothetical protein.
       0.764
KXO15153.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 0.00063 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.755
KXO15099.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.755
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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